Here's just a couple more ideas for places to check for problems:
In the front have you ever replaced the lower control arms due to wear on the bushings at the pivot? The two bushings per arm are not considered a separate replaceable part - you have to buy new control arms that come complete with the new bushings. I know I have some play in that area and need to replace mine - just haven't gotten to it yet. I'm pretty sure there's harsher forces on those bushings after the truck is lifted for years so it's more likely that we'd see accelerated wear in that area. It's not easy to check if there's play there, but while you're replacing other ball joints, you should be able to see if the lower control arms can be wiggled while you have the lower ball joint separated from the lower control arm.
In the rear, one other possibility regards the holes in the frame mounts or axle mounts that have gradually wallowed out over the years. I say this from experience as I could see that my bolt holes have gotten worse (oblong and not round) through the years. So I had washers welded in place at least at the frame side of the rear lower control arms to improve the situation. I found washers at the hardware store that are just barely big enough for the bolt - I think one part is english and one is metric, but the point is that it's intentionally a tight fit. Then I had the washers welded over the bolt holes to make a tighter hole as well as a thicker wall for the bolt to rub against every time you brake or accelerate. You may or may not have that problem, but you'd have to inspect your truck to see if the same applies. Caution: always only remove one control arm at a time and you should be fine. Check the other control arms for severe damage before removing the first one to make sure all the control arms are actually attached and in one piece. Since you have the Sonoran Steel adjustable panhard rod, that removes some play in the suspension by removing the rubber end(s), so there could easily be the same problem of wallowing out the mounting holes due to increased binding in the 5 link and less rubber to absorb the side to side tension or vibrations. So check the ends of the panhard rod to check for any damage there. I'm happy to have always used the stock panhard rod, so I can't relate to that one if it's one of the problems you're experiencing.