Is the server change supposed to affect how relative links work?

I've noticed that on this page http://www.4x4wire.com/toyota/4Runner/ the following relative links that were under the heading "Recent Articles" no longer work..

<!--#include virtual="/4x4/toyota/tech/landcruiser_elocker/blurb.stm" -->
<br clear=all>

<!--#include virtual="/4x4/toyota/4Runner/tech/suspension/philstet/blurb.stm" -->
<br clear=all>

<!--#include virtual="/4x4/toyota/4Runner/tech/O2_Sensor/blurb.stm" -->
<br clear=all>

<!--#include virtual="/4x4/toyota/maintenance/cv_axle/blurb.stm" -->
<br clear=all>

<!--#include virtual="/4x4/toyota/maintenance/timing_belt/blurb.stm" -->
<br clear=all>

<!--#include virtual="/4x4/toyota/maintenance/tacoma_4runner_30k/blurb.stm" -->

I'm not finished checking all my past articles.. they need to be checked especially if there are some changes how linking works..

Also would the item stated above about SSH login needing to be fixed affect FTP?

It looks like I'm seeing a strange thing where I'm not seeing all the files in a directory on a FTP login, but yet my home page web site still works, indicating that the files have to be there.... just can't see them in FTP... Could this be some old server/new server path/directory differences on FTP?

Dan